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Add an "Other" observation to a relative abundance table.
add_other.Rd
Add an "Other" observation to a relative abundance table.
Examples
rel_abund_phy(physeq) %>% add_other()
#> Loading required package: phyloseq
#> # A tibble: 1,001 × 5
#> sample_id asv level taxon rel_abund
#> <chr> <chr> <chr> <chr> <dbl>
#> 1 Smp1 ASV1 Phylum Pseudomonadota 0.00000212
#> 2 Smp1 ASV2 Phylum Spirochaetota 0.00000635
#> 3 Smp1 ASV3 Phylum Pseudomonadota 0.00168
#> 4 Smp1 ASV4 Phylum Pseudomonadota 0.0000191
#> 5 Smp1 ASV5 Phylum Actinomycetota 0.0000212
#> 6 Smp1 ASV6 Phylum Actinomycetota 0.00268
#> 7 Smp1 ASV7 Phylum Pseudomonadota 0.0000614
#> 8 Smp1 ASV8 Phylum Bacillota 0
#> 9 Smp1 ASV9 Phylum Pseudomonadota 0
#> 10 Smp1 ASV10 Phylum Bacteroidota 0.00000212
#> # ℹ 991 more rows